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mod from \"-!../../node_modules/mini-css-extract-plugin/dist/loader.js??ref--6-oneOf-1-0!../../node_modules/css-loader/dist/cjs.js??ref--6-oneOf-1-1!../../node_modules/vue-loader/lib/loaders/stylePostLoader.js!../../node_modules/postcss-loader/src/index.js??ref--6-oneOf-1-2!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./Analysis.vue?vue&type=style&index=0&id=5aaa80d6&scoped=true&lang=css&\"; export default mod; export * from \"-!../../node_modules/mini-css-extract-plugin/dist/loader.js??ref--6-oneOf-1-0!../../node_modules/css-loader/dist/cjs.js??ref--6-oneOf-1-1!../../node_modules/vue-loader/lib/loaders/stylePostLoader.js!../../node_modules/postcss-loader/src/index.js??ref--6-oneOf-1-2!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./Analysis.vue?vue&type=style&index=0&id=5aaa80d6&scoped=true&lang=css&\"","module.exports = \"\\n
\\n
Upload your data
\\n
Drag and drop your files into the 'Input datasets' box on the right. Alternatively, click the upload button and select your datasets to upload.\\nPermitted dataset formats are Genbank or EMBL.
\\n
Select your data by clicking them
\\n
Hold Ctrl (⌘ for mac) to select multiple. Hold Shift to select a range. Ctrl-a (⌘-a for mac) to select all.
\\n
Upload a phylogenetic tree in newick format (Optional)
\\n
The tree will decide the order of alignment in the visualization. The file must have a '.newick' extension and refer to the genomes by accession. If no tree is provided, one will be automatically computed.
\\n
Select a reference genome (Optional)
\\n
If you are analysing draft genomes, select a reference genome that is closest to your datasets species. The drafts will be stitched in the order of alignment to the reference. If no reference is selected the draft contigs will be stitched in the order they appear in the uploaded dataset. The dataset label will be used for the stitched sequence identifier. If you specify a newick file, it must include this identifier.
\\n
Specify a label to identify the analysis, and click submit
\\n
The pending job will appear in the Recent Jobs tab. Once complete a "Visualize" button will appear in the Job History page along with the option to download the analysis.
\\n
\\n

Be sure to bookmark this page to return to your work. The above URL is unique to you, and will be retained for three months following your last activity.

\\n\";","import mod from \"-!../../node_modules/mini-css-extract-plugin/dist/loader.js??ref--6-oneOf-1-0!../../node_modules/css-loader/dist/cjs.js??ref--6-oneOf-1-1!../../node_modules/vue-loader/lib/loaders/stylePostLoader.js!../../node_modules/postcss-loader/src/index.js??ref--6-oneOf-1-2!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./JobRunner.vue?vue&type=style&index=0&id=3b1af9e9&scoped=true&lang=css&\"; export default mod; export * from \"-!../../node_modules/mini-css-extract-plugin/dist/loader.js??ref--6-oneOf-1-0!../../node_modules/css-loader/dist/cjs.js??ref--6-oneOf-1-1!../../node_modules/vue-loader/lib/loaders/stylePostLoader.js!../../node_modules/postcss-loader/src/index.js??ref--6-oneOf-1-2!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./JobRunner.vue?vue&type=style&index=0&id=3b1af9e9&scoped=true&lang=css&\"","var render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('b-container',{staticClass:\"Analysis\",attrs:{\"fluid\":\"\"}},[_c('b-row',{attrs:{\"align-h\":\"between\"}},[_c('b-col',{attrs:{\"xl\":\"6\"}},[_c('b-tabs',{staticClass:\"analysis-tabs\",scopedSlots:_vm._u([{key:\"tabs-end\",fn:function(){return [_c('li',{staticClass:\"nav-item align-self-center progress-tab\"},[_c('Quota',{attrs:{\"usage\":(_vm.user && _vm.user.total_disk_usage) || 0,\"quota\":(_vm.user && _vm.user.quota) || 0}},[_vm._v(\" Quota used: \")])],1)]},proxy:true}]),model:{value:(_vm.current_tab),callback:function ($$v) {_vm.current_tab=$$v},expression:\"current_tab\"}},[_c('b-tab',{attrs:{\"title\":\"Recent Jobs\"}},[_c('Jobs',{ref:\"jobs\",attrs:{\"invocations\":_vm.invocations},nativeOn:{\"click\":function($event){$event.preventDefault();return _vm.$router.push('/history')}}})],1),_c('b-tab',{staticClass:\"help\",attrs:{\"title\":\"Instructions\"}},[_c('p',[_c('a',{staticClass:\"tutorial-start button-icon inline\",attrs:{\"href\":\"#\"},on:{\"click\":function($event){$event.preventDefault();return _vm.start_tour('tour')}}},[_c('i',{staticClass:\"icon icon-tutorial\"}),_vm._v(\" Tutorial\")]),_vm._v(\" Please see \"),_c('b-link',{attrs:{\"to\":\"/about\"}},[_vm._v(\"About\")]),_vm._v(\" and \"),_c('b-link',{attrs:{\"to\":\"/faq\"}},[_vm._v(\"FAQ\")]),_vm._v(\" for more information. \")],1),_c('p',[_vm._v(\" Check out these \"),_c('b-link',{attrs:{\"to\":(\"visualize?src=\" + _vm.origin + \"/demo/listeria_sample_analysis.gff3\")}},[_vm._v(\"example Listeria\")]),_vm._v(\" or \"),_c('b-link',{attrs:{\"to\":(\"visualize?src=\" + _vm.origin + \"/demo/pseudomonas_sample_analysis.gff3\")}},[_vm._v(\"example Pseudomonas\")]),_vm._v(\" analyses. \")],1),_c('HTMLFragment',{attrs:{\"content\":_vm.instructions}}),_c('div',{staticClass:\"show-api-key\"},[_c('a',{staticClass:\"button-icon inline\",attrs:{\"href\":\"#\"},on:{\"click\":function($event){$event.preventDefault();return _vm.show_api_key($event)}}},[_c('i',{staticClass:\"icon icon-api\"}),_vm._v(\" Show API Key\")]),_c('i',{staticClass:\"icon icon-info\",attrs:{\"title\":\"The API key is used for the command line interface and other utilities that access the backend directly.\"}})])],1),_c('b-tab',{staticClass:\"projects\",attrs:{\"title\":\"Projects\"}},[_c('p',[_vm._v(\"Select multiple projects by Ctrl-clicking their tabs. Drag datasets between to add to the project.\")]),(_vm.histories)?_c('Histories',{attrs:{\"models\":_vm.histories},on:{\"galaxy-history-create\":function($event){return $event.then(_vm.makeUploadHistory)}},scopedSlots:_vm._u([{key:\"default\",fn:function(histSlotProps){return _vm._l((histSlotProps.models),function(model){return _c('History',{key:model.id,attrs:{\"model\":model},scopedSlots:_vm._u([{key:\"default\",fn:function(hcSlotProps){return [_c('HistoryContents',{attrs:{\"history\":hcSlotProps.model}})]}}],null,true)})})}}],null,false,976229781)}):_c('div',{staticClass:\"text-center loading-spinner\"},[_c('b-spinner',{staticClass:\"align-middle\"}),_c('strong',[_vm._v(\"Loading...\")])],1)],1)],1)],1),_c('b-col',{attrs:{\"xl\":\"6\"}},[_c('JobRunner',{attrs:{\"histories\":_vm.histories,\"workflow\":_vm.workflow,\"selection_validator\":function (selection){ return selection.length<2?'You must select more than one dataset for comparison':null; }},on:{\"galaxy-workflow-invocation\":_vm.invoked}})],1)],1)],1)}\nvar staticRenderFns = []\n\nexport { render, staticRenderFns }","var render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('b-container',{staticClass:\"JobRunner\"},[_c('b-row',[_c('b-input-group',{attrs:{\"prepend\":\"Project\"}},[_c('b-form-select',{attrs:{\"options\":_vm.projects,\"disabled\":this.histories === null,\"disabled-field\":\"Loading..\"},model:{value:(_vm.project),callback:function ($$v) {_vm.project=$$v},expression:\"project\"}})],1)],1),_c('b-row',[_c('b-input-group',{attrs:{\"prepend\":\"Analysis Label\"}},[_c('b-form-input',{ref:\"invocation_name\",staticClass:\"invocation-name\",attrs:{\"placeholder\":\"Label this job to identify it from others\",\"required\":\"\"},model:{value:(_vm.invocation_name),callback:function ($$v) {_vm.invocation_name=$$v},expression:\"invocation_name\"}}),_c('b-input-group-append',[_c('b-button',{staticClass:\"invocation-submit\",attrs:{\"text\":\"Submit\",\"variant\":\"success\"},on:{\"click\":_vm.submit}},[_vm._v(\"Submit\")])],1)],1)],1),_c('WorkflowParameters',{ref:\"workflow_parameters\",attrs:{\"history\":_vm.history,\"workflow\":_vm.workflow},on:{\"input\":_vm.onInput}})],1)}\nvar staticRenderFns = []\n\nexport { render, staticRenderFns }","\n\n\n\n\n","import mod from \"-!../../node_modules/@vue/cli-plugin-babel/node_modules/cache-loader/dist/cjs.js??ref--12-0!../../node_modules/thread-loader/dist/cjs.js!../../node_modules/babel-loader/lib/index.js!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./JobRunner.vue?vue&type=script&lang=js&\"; 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export default mod; export * from \"-!../../node_modules/@vue/cli-plugin-babel/node_modules/cache-loader/dist/cjs.js??ref--12-0!../../node_modules/thread-loader/dist/cjs.js!../../node_modules/babel-loader/lib/index.js!../../node_modules/cache-loader/dist/cjs.js??ref--0-0!../../node_modules/vue-loader/lib/index.js??vue-loader-options!./Analysis.vue?vue&type=script&lang=js&\"","import { render, staticRenderFns } from \"./Analysis.vue?vue&type=template&id=5aaa80d6&scoped=true&xmlns%3Av-slot=http%3A%2F%2Fwww.w3.org%2F1999%2FXSL%2FTransform&\"\nimport script from \"./Analysis.vue?vue&type=script&lang=js&\"\nexport * from \"./Analysis.vue?vue&type=script&lang=js&\"\nimport style0 from \"./Analysis.vue?vue&type=style&index=0&id=5aaa80d6&scoped=true&lang=css&\"\n\n\n/* normalize component */\nimport normalizer from \"!../../node_modules/vue-loader/lib/runtime/componentNormalizer.js\"\nvar component = normalizer(\n script,\n render,\n staticRenderFns,\n false,\n null,\n \"5aaa80d6\",\n null\n \n)\n\nexport default component.exports"],"sourceRoot":""}